Online Appendix (Kralovicova et al.)

 

Supplementary Table 1.

 

Prediction of 3’ splice site utilization for the A and T alleles of INS -23HphI using different algorithms

 

Algorithm      

A allele

T allele

Reference

Web server

Information Theory

7.4

10

1, 2

https://splice.cmh.edu/

Neural Network

0.75

0.9

3, 4

http://genome.cbs.dtu.dk/services/NetGene2/

Neural Network

0.21

0.85

5

http://www.fruitfly.org/seq_tools/splice.html

Shapiro/Senapathy matrix

76.3

81.9

6

http://ast.bioinfo.tau.ac.il/

Maximal Dependence Decomposition

9.07

11.33

7

http://www.tigr.org/tdb/GeneSplicer/gene_spl.html

 

References

 

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